Filing nil ir-File returns is often quicker and easier to simply manually key into myIR. However, if you would prefer to generate your nil IR345 and IR348 returns from FlexiTime, you first need to create a zero pay in the tax period.
To do so, simply create a pay with the pay date during the tax period you wish to file a nil return for, add an employee to the pay and remove any gross earnings from their pay. The tax will be calculated as zero.
The IR345 and IR348 returns can then be downloaded as normal from the Pay Reports tab and uploaded to Inland Revenue.